PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv8_181760_mqsr.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 254aa    MW: 28294.3 Da    PI: 7.7275
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv8_181760_mqsr.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.74.3e-1360108354
                         HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         r+h e+ErrRR+riN  +++Lr+ lP +   ++ K++Ka+ L +++  Ik L
  Bv8_181760_mqsr.t1  60 RSHCEAERRRRERINGHLANLRTFLPCS---DKVKMDKATLLAEVISQIKVL 108
                         58*************************9...9**************999976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.83E-1349111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.58957108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.3E-1260111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.1E-1160108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.0E-1063114IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2605.0E-5151221No hitNo description
CDDcd048731.32E-8151220No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    Send to blast
MDSSFQVQND QAFPAFGSYM PNNMQSYWES PETNMGELLK TPASSRKKDT SKTKNSAALR  60
SHCEAERRRR ERINGHLANL RTFLPCSDKV KMDKATLLAE VISQIKVLKK QAIEATKDLL  120
VPTDANEVTV EPYDDGGGDD IADSLYAFRA SICCEYKPEL ITDIRQAISD LKLTITKAEI  180
STLEGRVKNL LIVTGCKEDI GHGKSEKFAK SIQDALCSVL QKMSVVEEYL PTTMLSNKRR  240
KISCFEPSTS SPSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16570ERRRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010686307.10.0PREDICTED: transcription factor bHLH30-like
RefseqXP_010686306.10.0PREDICTED: transcription factor bHLH30-like
RefseqXP_010686305.10.0PREDICTED: transcription factor bHLH30-like
RefseqXP_010686304.10.0PREDICTED: transcription factor bHLH30-like
RefseqXP_010686303.10.0PREDICTED: transcription factor bHLH30-like
RefseqXP_010686302.10.0PREDICTED: transcription factor bHLH30-like
TrEMBLA0A0J8BX030.0A0A0J8BX03_BETVU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.16e-33bHLH family protein